Fiji (ImageJ)

ImageJ distribution with batteries included for scientific imaging

★ Stars1k1,031 on GitHub
Last commit6 Oct 2026
LicenceGPL-3.0SPDX, from the repository
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From GitHub, fetched 19 Oct 2026.

Fiji is a distribution of ImageJ bundled with plugins for microscopy and life-science image analysis: segmentation, tracking, stitching, 3D visualisation and scripting.

Free alternative to

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QuPath

Image analysis

Open-source software for bioimage and digital pathology analysis

Stars
★ 1.5k
Licence
GPL-3.0
Updated

Alternative to Imaris